Index _ | A | B | C | D | E | F | G | I | M | N | O | P | R | S | T | V | W _ __init__() (boltz_data.ccd.ChemicalComponent method) (boltz_data.ccd.ChemicalComponentAtom method) (boltz_data.ccd.ChemicalComponentBond method) (boltz_data.ccd.CompressedChemicalComponentDictionary method) (boltz_data.mol.BZMol method) A angle_atoms (boltz_data.mol.BZMol property) angle_resolved (boltz_data.mol.BZMol property) aromatic_rings (boltz_data.mol.BZMol property) as_hex_color() (in module boltz_data.draw.color) as_rgb_float_color() (in module boltz_data.draw.color) as_rgb_int_color() (in module boltz_data.draw.color) atom_adjacency_list (boltz_data.mol.BZMol property) atom_adjacency_matrix (boltz_data.mol.BZMol property) atom_b_factor (boltz_data.mol.BZBioMol attribute) atom_charge (boltz_data.mol.BZMol attribute) atom_coordinates (boltz_data.mol.BZMol attribute) atom_element (boltz_data.mol.BZMol attribute) atom_id (boltz_data.ccd.ChemicalComponentAtom attribute) atom_id_1 (boltz_data.ccd.ChemicalComponentBond attribute) atom_id_2 (boltz_data.ccd.ChemicalComponentBond attribute) atom_is_aromatic (boltz_data.mol.BZMol property) atom_name (boltz_data.mol.BZMol attribute) atom_num_pi_electrons (boltz_data.mol.BZMol property) atom_residue (boltz_data.mol.BZBioMol attribute) atom_resolved (boltz_data.mol.BZMol attribute) atoms (boltz_data.ccd.ChemicalComponent attribute) B ball_and_stick() (in module boltz_data.draw.mol3d) boltz_data.ccd module boltz_data.cif module boltz_data.draw module boltz_data.draw.color module boltz_data.draw.mol3d module boltz_data.external module boltz_data.external.pdb_redo module boltz_data.external.rcsb module boltz_data.mol module boltz_data.parallel module boltz_data.rdkit module boltz_data.sequence module bond_atoms (boltz_data.mol.BZMol attribute) bond_is_aromatic (boltz_data.mol.BZMol property) bond_length (boltz_data.mol.BZMol property) bond_order (boltz_data.mol.BZMol attribute) bond_resolved (boltz_data.mol.BZMol property) bonds (boltz_data.ccd.ChemicalComponent attribute) BZBioMol (class in boltz_data.mol) bzcif_from_bzmol() (in module boltz_data.mol) BZMol (class in boltz_data.mol) bzmol_from_chemical_component() (in module boltz_data.mol) bzmol_from_chemical_components() (in module boltz_data.mol) bzmol_from_definition() (in module boltz_data.mol) bzmol_from_mmcif() (in module boltz_data.mol) bzmol_from_path() (in module boltz_data.mol) bzmol_from_rdmol() (in module boltz_data.mol) bzmol_from_smiles() (in module boltz_data.mol) bzmol_from_structure() (in module boltz_data.mol) bzmol_to_svg() (in module boltz_data.mol) C ccd (boltz_data.ccd.CompressedChemicalComponentDictionary attribute) chain_atoms (boltz_data.mol.BZBioMol property) chain_description (boltz_data.mol.BZBioMol attribute) chain_id (boltz_data.mol.BZBioMol attribute) chain_residues (boltz_data.mol.BZBioMol property) charge (boltz_data.ccd.ChemicalComponentAtom attribute) chemical_component_dictionary_from_path() (in module boltz_data.ccd) chemical_component_from_path() (in module boltz_data.ccd) chemical_component_from_rcsb() (in module boltz_data.ccd) ChemicalComponent (class in boltz_data.ccd) ChemicalComponentAtom (class in boltz_data.ccd) ChemicalComponentBond (class in boltz_data.ccd) cluster_sequences() (in module boltz_data.sequence) comp_id (boltz_data.ccd.ChemicalComponent attribute) compress_chemical_component() (in module boltz_data.ccd) CompressedChemicalComponentDictionary (class in boltz_data.ccd) concat_bzmols() (in module boltz_data.mol) D darken() (in module boltz_data.draw.color) decompress_chemical_component() (in module boltz_data.ccd) draw_3d_svg() (in module boltz_data.draw.mol3d) draw_rdmol() (in module boltz_data.draw) E element (boltz_data.ccd.ChemicalComponentAtom attribute) F from_ccd() (boltz_data.ccd.CompressedChemicalComponentDictionary class method) from_file() (boltz_data.ccd.CompressedChemicalComponentDictionary class method) G generate_conformer() (in module boltz_data.mol) generate_depiction() (in module boltz_data.mol) get_builtin_chemical_component_dictionary() (in module boltz_data.ccd) get_current_rcsb_pdb_ids() (in module boltz_data.external.rcsb) get_mmcif_from_pdb_redo() (in module boltz_data.external.pdb_redo) get_mmcif_from_rcsb() (in module boltz_data.external.rcsb) get_molecular_interfaces() (in module boltz_data.mol) get_remote_chemical_component_database() (in module boltz_data.ccd) get_residue_bounding_spheres_around_centroid() (in module boltz_data.mol) get_structure_from_mmcif() (in module boltz_data.cif) grid() (in module boltz_data.draw.mol3d) I iterate_assemblies() (in module boltz_data.mol) M mmcif_from_bzmol() (in module boltz_data.mol) mmcif_from_structure() (in module boltz_data.cif) model_config (boltz_data.mol.BZBioMol attribute) (boltz_data.mol.BZMol attribute) module boltz_data.ccd boltz_data.cif boltz_data.draw boltz_data.draw.color boltz_data.draw.mol3d boltz_data.external boltz_data.external.pdb_redo boltz_data.external.rcsb boltz_data.mol boltz_data.parallel boltz_data.rdkit boltz_data.sequence N name (boltz_data.ccd.ChemicalComponent attribute) num_angles (boltz_data.mol.BZMol property) num_atoms (boltz_data.mol.BZMol property) num_bonds (boltz_data.mol.BZMol property) num_chains (boltz_data.mol.BZBioMol property) num_residues (boltz_data.mol.BZBioMol property) O order (boltz_data.ccd.ChemicalComponentBond attribute) P parallel_imap() (in module boltz_data.parallel) R rdmol_from_bzmol() (in module boltz_data.mol) rdmol_from_chemical_component() (in module boltz_data.rdkit) rdmol_from_definition() (in module boltz_data.rdkit) rdmol_from_smiles() (in module boltz_data.rdkit) read_chemical_component_dictionary_from_mmcif() (in module boltz_data.ccd) read_cif_from_file() (in module boltz_data.cif) read_single_cif_from_file() (in module boltz_data.cif) residue_any_resolved (boltz_data.mol.BZBioMol property) residue_atoms (boltz_data.mol.BZBioMol property) residue_chain (boltz_data.mol.BZBioMol attribute) residue_name (boltz_data.mol.BZBioMol attribute) residue_names_from_sequence() (in module boltz_data.sequence) residue_number (boltz_data.mol.BZBioMol attribute) residue_ordinal (boltz_data.mol.BZBioMol property) rings (boltz_data.mol.BZMol property) S save_bzmol_svg() (in module boltz_data.mol) sequence_from_residue_names() (in module boltz_data.sequence) smiles_from_bzmol() (in module boltz_data.mol) structure_from_bzmol() (in module boltz_data.mol) subset_bzmol() (in module boltz_data.mol) T to_dict() (boltz_data.mol.BZMol method) to_file() (boltz_data.ccd.CompressedChemicalComponentDictionary method) transform_bzmol() (in module boltz_data.mol) type (boltz_data.ccd.ChemicalComponent attribute) V validate_bzmol() (in module boltz_data.mol) W write_cif() (in module boltz_data.cif)